rs29160703 SNP Detail

Summary

• ID
  rs29160703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28775108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTTA AGTACTTTAT TGGCTGACCC
  Y
  ATCACCCAGC CTAGAAAAGT ATTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38952025	mCV22628099	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss137505099	ENSMUSSNP5902123	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss323972611	CHEV_12_29409974	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29160703					SNP	T	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28775108 () rs orientation: forward

Symbol	Name	Function Class
Rr260043	regulatory region 260043	108 bp distal
Rr269361	regulatory region 269361	1082 bp proximal
Rr269362	regulatory region 269362	1879 bp proximal
Trappc12	trafficking protein particle complex 12	within coordinates