rs29161108 SNP Detail

Summary

• ID
  rs29161108
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69621964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCAATTT GCCTCTGAAT
  TGTAGAATCC CTCCCCCAGC CTTCAGTTAA CAGCGATTCT GGTTCCTAGA GTTGTTCCAC
  AGGTTTTGAG GTTCAGCCCC TCATTCTGGG CAGGACAGGC CACTCTAACC AGAGCACTTC
  TCTTCCCTTC TCTCGCCCTC CCTGCTGGGA GGTAGTAGAC ACGGGTTTCT TTATGGTGGT
  R
  ATTCTCAATT TAGGAAACAT TAAAGCTATT TGGAGTCCTT CAGTACCACC ACCACACCTC
  CTGTTTACTC CGGCTAGAAT GAAGCTTGAC CTTAGCATAG TGCTTGGCTT CTGCTAGCTT
  CCAATTTTCC AAGTGACCAC ACAGTCTGGT TGAAGAAACA GTCCCTACAA AGCTAGGAAG
  TTACAGGTTC TAGGACAGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38953430	mCV22702763	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss137859520	ENSMUSSNP5842551	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29161108					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69621964 () rs orientation: forward

Symbol	Name	Function Class
Rr257073	regulatory region 257073	1764 bp distal
Rr257074	regulatory region 257074	164 bp distal
Rr403327	regulatory region 403327	345 bp downstream