rs29162139 SNP Detail

Summary

• ID
  rs29162139
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28401583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGGGCTG GTCCTTCAGA
  TCCAAAATTA CAGAATCTCC ATGACACAAG ACAACAACAA GATATCTAAG AGGAGTCCTA
  GTGAGGTTCC AGTATTGATA GAATAGCAGA AGCCAGAGCC CTTATACCAG ACCAATGATT
  CATTGCAATG AATGCAAGCA AAGAAGTGTG GACTAAAGAG AGTACTATCA AACACACAGT
  R
  TCTGACACAC TACAGCTTCC ACAATGAGAT TGTTTTTCTG TTGGAGTTGC AATGGTGGAG
  GGCAGGGATG AAGGATGGGG GTTGGGGGTG GGGAAGATGA GTGGGATTGG GTTGCATGAT
  GTAAAATTCA CGAAGAACCA AAATAAAAAG GGGTTTGTTT AAAATAAAAT AAAATAAAAT
  AAAATAAAAT AAAATAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss38954674	mCV22635281	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs29162139					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28401583 () rs orientation: forward

Symbol	Name	Function Class
Gm25564	predicted gene, 25564	1190 bp downstream
Rr260026	regulatory region 260026	1418 bp proximal