rs29163479 SNP Detail

Summary

• ID
  rs29163479
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51742286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATTATAG TAATTTCAGG
  TGATTCCATT ACTCTGGGAA ATAACAGGGT ATTTGCACTT ATAAAGTAAA AGAGCAAACA
  AATATTACAG CCTACAGAAG GTTTCATAAG AACTGACATG AGGGGCTGGA AAAATGGCTC
  AGTGGTTAAG AGCACTGACT GCTCTTCCAG AGGTTCTGCG TTCAATTCCC AGCAACCACA
  K
  GGTGGCTCAT AACCATCTGT AATGGGATCT GATGCCCTCT TCTGGTGTGT CTGGAGATAG
  CTACAGTGTA CTCATGCATA AAATAAATAA ATAAATCTTT AAAAGAAAAA AAAAACTGAC
  ATGAGTTCAG ACCAAAGGAG CATACCACAT ATTACATAGC TACAACCAAA AAGGAGGAGG
  CAGCTCTGAC CTGCACTGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38957694	mCV24841675	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss137724521	ENSMUSSNP4032420	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29163479					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51742286 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates
Rr256575	regulatory region 256575	within coordinates