rs29165850 SNP Detail

Summary

• ID
  rs29165850
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69621241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTAGTTAA AGCTGATTAG
  AAGTTTTAAG TCCGTAGAAG CCGCATGTCA GATATAAAGC TGAAGTTCAC CTTGAACTTT
  ATTTTTAGAA CTGCACTAAT TAGAACAAAG TTAGACTCGT AAAGGCCTCT TCCTTGCACA
  GACGGGAATC TACAGCAGAA AGGCCATTTA CAAATCACAA CATATGCAGC TTCGTGAGCC
  M
  CATAGGTTGA ACAGAATGAA ACAGAAAGCT ACACCAAAGA CAACTTCCTG GGAAAGCCGT
  CTCACTCAGC TTCTGCCGTG TTTTCTCCAG CAAGGACCCT CCTAATGGGT AGACTAGTTC
  TGAAAATCAA ATTTAATTAA AAATTTTTAA AATCTGAGGG CTGGCTGCAA TTCAAAACCG
  AGTCTTTTCA CAGCCACCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38962836	mCV22702565	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss137859505	ENSMUSSNP3868092	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29165850					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69621241 () rs orientation: forward

Symbol	Name	Function Class
Rr257073	regulatory region 257073	1041 bp distal
Rr257074	regulatory region 257074	160 bp proximal
Rr403327	regulatory region 403327	77 bp upstream