rs29168738 SNP Detail

Summary

• ID
  rs29168738
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100807527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTT TTGAGTCTCT CACTGTCAAC
  Y
  AGGCTGCAAC AGCTCCCTGG ATCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38970128	mCV24923638	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss137996648	ENSMUSSNP4073753	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss324138608	CHEV_12_102079478	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29168738					SNP	T	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100807527 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Rr403460	regulatory region 403460	within coordinates
Rr471351	regulatory region 471351	1549 bp distal
Rr471352	regulatory region 471352	1024 bp distal
Rr471353	regulatory region 471353	135 bp proximal