rs29168980 SNP Detail

Summary

• ID
  rs29168980
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:17729053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT ACTGCTTTTT TGTTTCTTTG
  Y
  TTTTTTCTTT CTTTTTCATT AAAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38970942	mCV24191587	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss137216548	ENSMUSSNP3496876	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss323926883	CHEV_12_17685858	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29168980					SNP	T	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:17729053 () rs orientation: forward

Symbol	Name	Function Class
Rr463533	regulatory region 463533	1103 bp distal