rs29171546 SNP Detail

Summary

• ID
  rs29171546
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28778119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC AATTGCTCCA GAGTGTTTAA
  Y
  TGACTGTATA TAACATGATT TTCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38978215	mCV22628063	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss137505126	ENSMUSSNP3271596	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss323972620	CHEV_12_29412985	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29171546					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28778119 () rs orientation: forward

Symbol	Name	Function Class
Rr269361	regulatory region 269361	1457 bp distal
Rr269362	regulatory region 269362	502 bp distal
Trappc12	trafficking protein particle complex 12	within coordinates