rs29171931 SNP Detail

Summary

• ID
  rs29171931
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:41373616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTAAAATGT TGTGCATCAT ACAAACCTAT TTAAATTTAA
  TGATAATACA AATCAATAAC AGAATGATCT GTATCAAACA CACCTAAATA GTTCCTAGGT
  M
  AAACATAAAG TCACAAAATA TCTTAGAAAG TACTTTGAAC TCAATACCAT ATCCATGGTT
  GTGGGATCCA GGTAGTCAGG GCTTTATAGT ACTGATCCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss38976462	mCV24386146	ABI	CRAMUS_MOUSE	f	SNP		A	A					A		C
ss52384982	NES15380799	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		C	C	A	A		C	A		A
ss137658782	ENSMUSSNP1640218	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							C
ss324016148	CHEV_12_42050204	CHEVERUD	SCREENING_POP	f	SNP													C			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29171931					SNP	A	A	A	A	A	A	A	A	C	C	A	A	C	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52384982	NES15380799	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:41373616 () rs orientation: forward

Symbol	Name	Function Class
Gm47376	predicted gene, 47376	within coordinates
Immp2l	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	within coordinates
Rr387110	regulatory region 387110	1626 bp upstream