rs29173275 SNP Detail

Summary

• ID
  rs29173275
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110243226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGGTGTAG CCTATTTCCC ACACAACACC CGCCCCTGTC
  CAGAAATGTG GATGGCAGGG TTTCCCAAGT GTCCCATATC AGAAAGGGGT GATGTTCAGG
  S
  GTGACTGGTC CCATAGAGCA GGACCAGAAG GACTTCTATC TGTCCCAGAC TATGGCTGCC
  ACATGGCATA TGCACCTACA CACATAATGC GAGAAGGGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38972911	mCV24944664	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29173275					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110243226 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5110	CpG island 5110	486 bp proximal
Dio3os	deiodinase, iodothyronine type III, opposite strand	within coordinates
Mir1247	microRNA 1247	1256 bp downstream
Rr472865	regulatory region 472865	553 bp distal
Rr472866	regulatory region 472866	373 bp proximal
Rr472867	regulatory region 472867	1287 bp proximal
Rr472868	regulatory region 472868	1392 bp proximal