rs29174430 SNP Detail

Summary

• ID
  rs29174430
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:5269411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTTAGCTGGC CAGGATTCAG CCCTAGGCCT AGGCTTTCAG TACTCTCAAT GGCCTTGTGG
  TGTCGGGGAG AGCAGAGCTA CTTTTGAGAA AATCCAAATT CCATAATTAC AGGGCTTAAT
  ATATGACCTA AAATGACAAA TGTCCAAAAT GCTTTTCAGA TAATAGGTTT GAGGGGAAAA
  TGCCACAAAT TCCTTTTCCT GGGCCCAATT TCTTCCTTTC TTTCTTTCTT TCTTTCTTTC
  TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCCTTC
  Y
  TTCCTTCCTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC
  TTCCTTCCTT CTTTTTTTTC CCTGCAAACC AACCAACCAA ACAAAAAGCA ACCTCCTTTT
  GGGAGAGGCT GTACCCAGTG CCGGCTTCAG ATGAGCGGTA CTGAAAGAAC GTTCTTTCTC
  CGTCCCTCCC TTCCTGTGTG TGCCTTTGGT TTGAGAGATT CTGGCTGTGG GTTTTGATGT
  AGTAGTGATT TTTCCCCCCC AAAAAGCATA CATGATTCAG AGACTTTTCT CACGGGACTA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss38981956	mCV25234615	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss38993278	mCV25234616	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29174430					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:5269411 () rs orientation: forward

Symbol	Name	Function Class
Klhl29	kelch-like 29	within coordinates
Rr267587	regulatory region 267587	191 bp proximal