rs29174468 SNP Detail

Summary

• ID
  rs29174468
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107091922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTA GCTCTCTTCC CCTCAGGTTT
  Y
  CTTCATATGT GGTCTTGTGG ATTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38982152	mCV22891494	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss138025001	ENSMUSSNP5150090	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss324146400	CHEV_12_108363873	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29174468					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107091922 () rs orientation: forward

Symbol	Name	Function Class
Gm16084	predicted gene 16084	within coordinates
Rr369596	regulatory region 369596	1049 bp downstream
Rr369597	regulatory region 369597	521 bp upstream
Rr472319	regulatory region 472319	1745 bp distal
Rr472320	regulatory region 472320	928 bp distal
Tssr114936	transcription start site region 114936	1207 bp downstream
Tssr117620	transcription start site region 117620	1943 bp upstream