rs29179894 SNP Detail

Summary

• ID
  rs29179894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100694798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAATAAATCA AGAAAGAAAG AAGGAAAGAA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG
  GAAGGAAGGA GGAAGGAAGG AAGGAAGGAA GGAAGGAAGG AAGGAAGGAA GGAAGGAAGG
  AAGAAAGAAA GAAGGGAGGG AGGGAGGGAG GAAGAAAGGA AGGGAGGAAG GAAGGAAGGA
  AGGAAGGAAG AAAGAAAGGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA
  AGGAAGAGAA GAAAGAAAGA AAGAAAGGGA GGGAGGGAGG GAGGGAGGAA GAAAGGAAGG
  R
  AGGAAGGAAG GAAGAAAGAA AGGAAAGAAA GAAAGAAAGA AAGAAAGAAA GGAAGGAAGA
  AAGAAAGAAA GAAAGGAAGA AAGGAAGAGA GAGAGAAAAA GAGAGAGTGG AGACATCTAG
  GTGCCCCCAT TAGATCGGTG CCCCACAGCT CCCTGGGTGA ACCTGCCTGG CATGCCTGTT
  CTGCTACACT GTGACTTCAT ACTTAGCAGC GCTATGCAGA GCTGATCAAC AGCTGTGTGC
  AATTGTTCAT TTGTTCGTGC AACAACTTTC ATTCCCATTA TGTGCCAATT ACTGTGGTAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss38998030	mCV24621959	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs29179894					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100694798 () rs orientation: forward

Symbol	Name	Function Class
Rr471326	regulatory region 471326	540 bp proximal
Tssr114711	transcription start site region 114711	847 bp upstream