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rs29180882 SNP Detail
Summary
  • ID
    rs29180882
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr12:73419639 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GAGAGGAAGA GGAGAAATGT
    GGTATTATGT GCCTAGGACG TGTGAAGTAG AATAGGTCAC GTGATAGTAC AAAGTTGTGA
    GAAAAGAAAG GATCAAAGTA TCTTTACAAG CGAGGATATA ATCAAGTGAG GGATGGGGTT
    GCCATCCCAC AATCACAGCT CTGACCCATG ATAATTCTTG CCTGAAAGAA TTACAGGGAT
    R
    GAAATGGAGA GGAGCCTGAG GAAAAGAAGG TCCAGTGATA GGCCCAAAGT GGGATCCAGC
    TCAAGGGGAG GACCCAAGGC CTGACAATAT TACTGAGGCT ATGGAGCACT CACAAAAAGG
    GACCTATCAT GACTGTCTTC TGAAAGACCC AACAAGCAGC TGAAAGAGTC AGATGCAGAT
    GTTTGCACCC ATCCAATGGA                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss38996451 mCV24989755 ABI CRAMUS_MOUSE f SNP A G A A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs29180882 SNP A G A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:73419639 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
D830013O20Rik RIKEN cDNA D830013O20 gene within coordinates
Rr257323 regulatory region 257323 1762 bp proximal
Rr264129 regulatory region 264129 1140 bp distal
Rr264130 regulatory region 264130 1783 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory