rs29180882 SNP Detail

Summary

• ID
  rs29180882
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73419639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGGAAGA GGAGAAATGT
  GGTATTATGT GCCTAGGACG TGTGAAGTAG AATAGGTCAC GTGATAGTAC AAAGTTGTGA
  GAAAAGAAAG GATCAAAGTA TCTTTACAAG CGAGGATATA ATCAAGTGAG GGATGGGGTT
  GCCATCCCAC AATCACAGCT CTGACCCATG ATAATTCTTG CCTGAAAGAA TTACAGGGAT
  R
  GAAATGGAGA GGAGCCTGAG GAAAAGAAGG TCCAGTGATA GGCCCAAAGT GGGATCCAGC
  TCAAGGGGAG GACCCAAGGC CTGACAATAT TACTGAGGCT ATGGAGCACT CACAAAAAGG
  GACCTATCAT GACTGTCTTC TGAAAGACCC AACAAGCAGC TGAAAGAGTC AGATGCAGAT
  GTTTGCACCC ATCCAATGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38996451	mCV24989755	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29180882					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73419639 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	1762 bp proximal
Rr264129	regulatory region 264129	1140 bp distal
Rr264130	regulatory region 264130	1783 bp proximal