rs29180903 SNP Detail

Summary

• ID
  rs29180903
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28852666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATT TATTTATTTA TTTGTGTATG
  Y
  ATGAATGTGT GCGATTGCTT GGTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38997760	mCV23344565	ABI	CRAMUS_MOUSE	f	SNP	T		C	T
ss137506970	ENSMUSSNP3765754	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29180903					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28852666 () rs orientation: forward

Symbol	Name	Function Class
Eipr1	EARP complex and GARP complex interacting protein 1	within coordinates
Rr464343	regulatory region 464343	1869 bp distal
Rr464344	regulatory region 464344	275 bp proximal
Rr464345	regulatory region 464345	1978 bp proximal
Tssr3815	transcription start site region 3815	1958 bp downstream
Tssr113054	transcription start site region 113054	442 bp downstream