rs29180980 SNP Detail

Summary

• ID
  rs29180980
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:32116154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGGCACC TATGGAGGGG
  ATAGAGGTGA CAGGGTCCTC ATGCCACTGT CCTGCCTCCA GCCCCTGTGT CTCCTGGTAG
  GACAGTGACT GCTCCCTCCT CCTCTGACCC ATCAGACATC ATTGCTCCTG CAATCCCTCC
  TGCGGCAGCA CAATTTCCTC TCCAACTAAA CCATTCTAAG GCAAGCTGAC TGGGATGTCC
  Y
  CTGCTTCTTG TCTCCCGCTA GTCAAGCCCT GAATAATCCT CTCTCCTGCG TGGGAGTGCT
  AACTCTGACT CGCTTCTAAC CAATAGAGTA TGACAAAAGG GATGAATTAA AGTCTCAAAG
  CCGTTGGTTT TCAATTAATC AAAAGGGAGA TTATCTTGGG CCTGACTTAA TCAGGGGAAA
  GCAATTAAGA AGGAACAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss38992618	mCV22595897	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss137572557	ENSMUSSNP5763095	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29180980					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:32116154 () rs orientation: forward

Symbol	Name	Function Class
Gm51992	predicted gene, 51992	within coordinates
Gm60244	predicted gene, 60244	within coordinates