rs29181346 SNP Detail

Summary

• ID
  rs29181346
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:36531656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCACAGTA CACAGTACAG
  ATATGATTTA TTGATATGCC AACTTGTTTT TACAGTGATC ATGTCTTTTT ACCCTCAACC
  ATGCAGACCC ATTTCCTTTT CTTTCTTTTT TTTTTCTTTT CGAGAGCTGA GGAACCCATG
  ACCTTGTGTT TGCTATGCAA ACACTCTACC ACTGAGCTAC ATCCCCAACC CCCCAGACCC
  W
  TTTTCTGAGC ATGAGAGTTG ATCATGTGTC AGAACGTGGT CCATGAGTCA AACTGTCTGA
  GGAGAGTTCT GAGGTTGTGA GCAAACTCCA AGTAAAAAGA GCAAAAGTCT TATAACCTCT
  GCTACTCCGT AACATAGGTT TGTTCGTGGA ATGTGCTTTC AAGCCCTCCT CAGGTGTAAT
  AATAGGAGTG GGTTTACTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss38992427	mCV22951492	ABI	CRAMUS_MOUSE	f	SNP	T	A
ss324008667	CHEV_12_37208244	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs29181346					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36531656 () rs orientation: forward

Symbol	Name	Function Class
Crppa	CDP-L-ribitol pyrophosphorylase A	Intron
Rr387069	regulatory region 387069	within coordinates
Rr465183	regulatory region 465183	1768 bp proximal