rs29183358 SNP Detail

Summary

• ID
  rs29183358
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100807514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC CTGCACCCTA GTTTTGAGTC
  Y
  CTCACTGTCA ACCAGGCTGC AACAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38999155	mCV24923648	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss137996646	ENSMUSSNP6725369	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
ss324138607	CHEV_12_102079465	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29183358					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100807514 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Rr403460	regulatory region 403460	within coordinates
Rr471351	regulatory region 471351	1536 bp distal
Rr471352	regulatory region 471352	1011 bp distal
Rr471353	regulatory region 471353	148 bp proximal