rs29184097 SNP Detail

Summary

• ID
  rs29184097
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26495731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCC AACTCACATG ACGAACACCC
  R
  TGCCGAGGGT GACTTGAACA TTTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38999610	mCV24521334	ABI	CRAMUS_MOUSE	f	SNP	G	G	G				A	A
ss52328560	NES15372025	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	G	G		A	G	A	G	G	A	A
ss137439027	ENSMUSSNP5676018	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29184097					SNP	G	G	G	A	G	G	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52328560	NES15372025	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26495731 () rs orientation: forward

Symbol	Name	Function Class
Rr464136	regulatory region 464136	1343 bp distal
Rr464137	regulatory region 464137	643 bp proximal
Rsad2	radical S-adenosyl methionine domain containing 2	within coordinates
Tssr112998	transcription start site region 112998	1979 bp downstream
Tssr112999	transcription start site region 112999	1914 bp downstream
Tssr113000	transcription start site region 113000	1813 bp downstream
Tssr113001	transcription start site region 113001	1326 bp downstream
Tssr113002	transcription start site region 113002	1302 bp downstream
Tssr113003	transcription start site region 113003	1214 bp downstream
Tssr113004	transcription start site region 113004	1163 bp downstream
Tssr113005	transcription start site region 113005	1154 bp downstream
Tssr113006	transcription start site region 113006	787 bp downstream
Tssr113007	transcription start site region 113007	697 bp downstream
Tssr113008	transcription start site region 113008	529 bp downstream
Tssr113009	transcription start site region 113009	514 bp downstream
Tssr113010	transcription start site region 113010	324 bp downstream
Tssr115908	transcription start site region 115908	1987 bp upstream
Tssr115909	transcription start site region 115909	1903 bp upstream
Tssr115910	transcription start site region 115910	1849 bp upstream
Tssr115911	transcription start site region 115911	1801 bp upstream
Tssr115912	transcription start site region 115912	1787 bp upstream
Tssr115913	transcription start site region 115913	1752 bp upstream
Tssr115914	transcription start site region 115914	1704 bp upstream
Tssr115915	transcription start site region 115915	1661 bp upstream
Tssr115916	transcription start site region 115916	1620 bp upstream
Tssr115917	transcription start site region 115917	1570 bp upstream
Tssr115918	transcription start site region 115918	1555 bp upstream
Tssr115919	transcription start site region 115919	1524 bp upstream
Tssr115920	transcription start site region 115920	1492 bp upstream
Tssr115921	transcription start site region 115921	1116 bp upstream
Tssr115922	transcription start site region 115922	1091 bp upstream
Tssr115923	transcription start site region 115923	998 bp upstream
Tssr115924	transcription start site region 115924	938 bp upstream
Tssr115925	transcription start site region 115925	923 bp upstream
Tssr115926	transcription start site region 115926	572 bp upstream
Tssr115927	transcription start site region 115927	531 bp upstream
Tssr115928	transcription start site region 115928	1440 bp downstream
Tssr115929	transcription start site region 115929	1470 bp downstream
Tssr115930	transcription start site region 115930	1746 bp downstream
Tssr115931	transcription start site region 115931	1784 bp downstream