rs29184160 SNP Detail

Summary

• ID
  rs29184160
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52844571 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAAGTGTGAT TCCTTCTTTT CAGATAATTC TAGCTTGTGT CAAAGTGGCA AAACCTTACT
  AGGACACTAG GTTACTACGT CAATGTTTAA GACAGGGAGG GAAAGAAGAT TCAGAGGAGA
  GAAGGGAGGA GGGAAGGGGT AAGAAAGGGA GAGAGAGGGG AGCACATGAG AAAAGGATCA
  GTGTAAGTCA GAGAGCCCCA TGCCACCGAT AGTTGCTCTT GGGAAGATCT CAGCATGATG
  GCAGAGCTAT GGCTGGAGGC AGCCCCAGCA GAATGTCAGC CCCCAATAGT GCCCTCCTAC
  R
  GCCGGCCTTA GGGAGCATTG TGACTAGGAT CCAGAGATAA TTTATTCAGA GGAATCTTGG
  GGTGAGAGTA AACTAGAAGT TAGAGGACAC TCCTTTGTAC TGCTCTCTCC AGTGCTGATC
  TAGTGTGTGG CTTCCCTAAG TTGATGCAGG ATTGAGCTTG TAAGGCAAAT CAGCTGTTAT
  TCCACAAATC CTTCGCATGT ACACAGGAAG TTAGTTAAAT GCTAGAAGTG AGGGGGGTAA
  CACACCTACC GTTAGAAGAC ACAGCTAAAA ACACTGTTAA AAATTCAAAT GGTTGGACAC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss39002037	mCV22517221	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs29184160					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52844571 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	1702 bp downstream
Rr466053	regulatory region 466053	1001 bp distal
Rr466054	regulatory region 466054	1936 bp proximal