rs29184477 SNP Detail

Summary

• ID
  rs29184477
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33449929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAATAGAA CAGAATGTAT
  CTTAAAGTGT TTTCTCAAAA TTACTTTCTA CAGGGTAAAT ATCAATAACG TAGGCTATCT
  GCATGCTTTA CTCTTTTTGT AAGAGTTTTG TTTTTATTTT CTGTGTATGA GTGTTTGCCC
  GAGTGTGTCT GTCTGTGCAC CTCATGCATG CAGTGACTGC AGAGACCAGA AGAAGGTGGT
  R
  TAGGACTGAA GTTACAGCGG CTGGGCAGTG AACCCAGGTC CTCTGGAAGA GCAGCCTCTT
  AACAGCTGAG CCATCTCTCC AGCCCCCAGC CGGGCAATTT TTGATTGAGA TGTTACAGCA
  TTGAGAGTGA TGAATAATAG CCCTGTCAGA AGACAACAAA CAAACAAACA AACAAACAAA
  CAAACAAAAA ACCCTAGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39002133	mCV22775029	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss137584541	ENSMUSSNP6219185	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29184477					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33449929 () rs orientation: forward

Symbol	Name	Function Class
Efcab10	EF-hand calcium binding domain 10	within coordinates
Gm47506	predicted gene, 47506	1435 bp downstream
Gm61262	predicted gene, 61262	1338 bp downstream
Rr256108	regulatory region 256108	within coordinates