rs29186433 SNP Detail

Summary

• ID
  rs29186433
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107901648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATATGATCGA AGGTGCCCAT TGATTCCCAC AGCAGACACT ATCTCCCGGC GCCTCCCCCG
  CCACCCCCCC CCCCACACAC ACACCGCCTG CCACATCTCC CCAGCCAAGC ACCCTTCTCC
  AGGAACACGT GACAGATGAT CTTGTAACCA GGCAACCAGG GGAAAGAAAG GTTCCCAAGT
  TCCTCTACAC AGGCAAAGGA GGATGGTCGC CTTCTTTGCA CTGTGCCTAC TGGCTGCAAA
  TATCTTTTCC AGATCTCACA AAGGAGATGG GGACAGCATT TAAACACCCT GACCCCCCCC
  W
  CCCACCCACC CTACTCCCCG TCGGTACGCA CCAGGTGGGC TGACCCACTC TGCAACCGGC
  AGCAACCTGT CCTCCATCAT CACCCAAAGC TGGCTCCCAG AGAGCTTGCA GTGTCAGGAC
  ATTGTCAGCT AACCCCCTAG CCTCCTTTCC TGACCATGCC CGGCCCCGGA AGCTAAGGCA
  ACAGGAGAGT GTCCACCCTC AAGGTCTCTG GAAGTCTGAA GCACCCTAGG GAAATGTCCG
  CCTTGTCAGA GTGTATGTGG GTGTCTGGTG AAATGGGACG ATATGACGAG GTCCCGAGGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39002981	mCV22713216	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29186433					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107901648 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	1403 bp upstream
Rr472389	regulatory region 472389	within coordinates