rs29188065 SNP Detail

Summary

• ID
  rs29188065
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73421394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTAATTTTT CAGTACTCAG CAGCATGTTT TCAAATAACC CAGGAATCTA GAAAAAATGT
  AAAAATACAT CATCTAAGCT TCGTCTCATG GCGGAGGGGA ATAGTGAGAA AGAACAAACT
  AAACTCAATA CAAGGGAAAT AAGAGTGGAA ACCAATAAAA TTGAAAACAG GAAAGAAAAA
  AAAACCCAAC AGAGAAAGAT TAATAACAGG AAAACCTGGT TCTCTGAGAA GCCCAATAAA
  ATGGGTAAGT GTCACAGACA GGAGGAAAGT ATCCTGACTT TGCCTGCAGA CCAAGAGTTG
  K
  ATCTTAGACT GAACCGTGGC TGCAGTCTGT GCTTGACCTT AATGCCACCC AATCTGACTG
  CAGCGGCCTC CAGTGGCCTC CCCAGAGTTA AGGGGAGAAA AGTTGGGAGC CCTTTGGCAC
  CTTTTCTTCT GCAATGGCGT CCTTCTGGCC TGAACTGTGG GCAGCAGTCA GTTTTGGCCT
  TGCTCTCTTT TATTTCATCC TTAGTCAGTG GGTGGAGGCC AAAATAGAGA AGAGCTCTCG
  GGAGTGTGTG TGTGTGTGTG TAGGGGATGT AGTGTGTTTG TGTGTGTGTG TGTGTGGGGA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38999803	mCV24989796	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29188065					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73421394 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	7 bp proximal
Rr261220	regulatory region 261220	1207 bp proximal
Rr264130	regulatory region 264130	28 bp proximal