rs29189715 SNP Detail

Summary

• ID
  rs29189715
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65206808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTGGTTGG CACTTTAGAA
  ACAGAGAGGG AAAAGTCTTC TGACCAGTAT CATATGCTTT CATAATAATA AATACCAGTG
  ACATAAAAAT TTCCCTTTAG CTGGGCTTTT AATCACAGCA CTCAGGAGGC AAGGCAGGCA
  GATCTCTGTG AGCTGGAGGC CGGCCTGGAG TTCCAGGACA GGTAGGGCTA CACAGAGAAA
  Y
  CCTGGGGGCA GAGGGAGATT GGGGACAAGG AGGGAATTGG GTTAGCTGGA GAGATGGCTC
  AGTGGTTGGG GTCACTGACT GCTTTTCCAA AGGACCCAGG TTCAAATCCC AGCACTCACA
  TGGTAGCTCA CAACTGTCTT TAACTCCAAG ATCTGACACC TTCACACAGA CATGCATACA
  GCCAAAACAC CAATGCACAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39008221	mCV23638452	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss137833007	ENSMUSSNP4469379	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss324072234	CHEV_12_66261021	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29189715					SNP	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65206808 () rs orientation: forward

Symbol	Name	Function Class
Mis18bp1	MIS18 binding protein 1	within coordinates
Tssr116466	transcription start site region 116466	829 bp upstream