rs29190277 SNP Detail

Summary

• ID
  rs29190277
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52847260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTACTTG TCCCAGTTAC
  GGTAGAGGGA CCACTCTTTG CCTAGGCATA CATACATCTC TATCAACAGG AAACACATCC
  CCCAGTTGTG CCTTCAATTC ATTCACTGCT GTGTAACACT ACTGAGCCAG CCTGGCCCTT
  GCCTGCCTGG GTACTTAATG CCTGGGTACT TAATGCCTGG ACTAATCTTG CTTTCTTTTA
  Y
  CTTTTATCTT CCCCACTCTT GCAGCCTATT TCCCATTCAG TAGCTATTTT TAAAAACTGT
  CTATCAGAGT ATGCCATTCT TCTGTTTTGG ATCTCTTCCT TTGACTCTTT ACTGCCTAAG
  TCTCTGGTGT GGCTCCTCCC ATTCACCCTG ATCGTTAAAG CCCCAGAGAA TGTCAAGCTA
  GTTCTTGCCC TGTAGCTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39005775	mCV22517212	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss324040948	CHEV_12_53901464	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29190277					SNP	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52847260 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	within coordinates
Rr466054	regulatory region 466054	469 bp distal