rs29191957 SNP Detail

Summary

• ID
  rs29191957
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110667179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAGCAGC AGCCCGGTTT
  CACCTAGCTA GAAGGAAGCT GCTTAGGCAG CCGCAGGCAA CGGCATGAAA CTGTTTCCGG
  CTCACGTCCC AATGTGGCTG ACCATTATTG GGATATAAGC GGCTGGTGCA GGCACAGTTC
  AGTAAAACTG GAAGACCCTG GAAAAGAAGG ATGAGAGAGA CTGGAGTGTA TGTGAGTGGG
  R
  TCCAAAACTA GGGTGTGGGT GTAAGAGAGA ATGGGTAGGA GCTTCCATCC CAACTGTTAG
  CACTTTGGGC TCTGTCCCAG TTACCTGGCA AGAAACAGGT GTGGCTGATT CACTATGAAG
  GGGCTGCTGG CCCTTTCTGC TCTCTCTTGC CTGCTTGCTC TCCTCTCTCC ATTCCCCTCC
  CCCCTCTCTC CATGTGCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39005996	mCV24497705	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss138692788	ENSMUSSNP2513469	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29191957					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110667179 () rs orientation: forward

Symbol	Name	Function Class
Gm60091	predicted gene, 60091	1385 bp downstream
Gm60092	predicted gene, 60092	1167 bp downstream
Rr472970	regulatory region 472970	1670 bp distal
Rr472971	regulatory region 472971	1242 bp distal
Rr472972	regulatory region 472972	1011 bp distal
Rr472973	regulatory region 472973	within coordinates
Rr472974	regulatory region 472974	1793 bp proximal
Tssr115233	transcription start site region 115233	1641 bp downstream
Tssr117793	transcription start site region 117793	1897 bp downstream