rs29192450 SNP Detail

Summary

• ID
  rs29192450
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110340367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCGTCACTAA TAAGCATCCA CTTGTAGAAA AAAAAAAAAA
  AAGCACAGAG ATCCTCAGTA TCTAGCAGAG GTTGCACAGC CAGAAGCTGG CAGAGTAGGA
  R
  ATTGCAGTCC ACCTGTGTCC AGTCCAAAGC CTGTGTTTAT CTTGTATTGC TTGTTGGCCC
  TCTCAGGAGT TGGGGTCCCA GGCTAGTCTT CTGGAACCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39009127	mCV23148644	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss138689909	ENSMUSSNP3274519	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss324157756	CHEV_12_111612143	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29192450					SNP	G	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110340367 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5113	CpG island 5113	114 bp distal
Rr472872	regulatory region 472872	within coordinates
Rr472873	regulatory region 472873	333 bp distal
Rr472874	regulatory region 472874	1071 bp proximal
Tssr115196	transcription start site region 115196	1580 bp upstream