rs29193568 SNP Detail

Summary

• ID
  rs29193568
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:3955303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC CCAAGTGCTG GGATTAAAGG
  Y
  GTGCGCCACC ACGCCTGGCT TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39009217	mCV22925062	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29193568					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:3955303 () rs orientation: forward

Symbol	Name	Function Class
Dnmt3a	DNA methyltransferase 3A	within coordinates
Tssr112532	transcription start site region 112532	1103 bp downstream
Tssr112533	transcription start site region 112533	49 bp upstream
Tssr112534	transcription start site region 112534	1505 bp upstream