rs29194037 SNP Detail

Summary

• ID
  rs29194037
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:11484695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT CTGCCCCGGA GTAAGGAGGA
  R
  GAGAGGCTGT GTGATGTCTA CGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39009697	mCV24151110	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	A
ss137130098	ENSMUSSNP5766770	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29194037					SNP	G	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:11484695 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4418	CpG island 4418	1795 bp proximal
Rr462902	regulatory region 462902	637 bp proximal
Rr462903	regulatory region 462903	936 bp proximal
Rr462904	regulatory region 462904	1909 bp proximal
Tssr3791	transcription start site region 3791	1781 bp downstream
Tssr3792	transcription start site region 3792	1824 bp downstream
Tssr115745	transcription start site region 115745	944 bp downstream
Tssr115746	transcription start site region 115746	1804 bp downstream
Tssr115747	transcription start site region 115747	1856 bp downstream
Tssr115748	transcription start site region 115748	1913 bp downstream
Vsnl1	visinin-like 1	within coordinates