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rs29195303 SNP Detail
Summary
  • ID
    rs29195303
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr12:33203630 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCCTTCCCTC CTCTGCTGGA
    AGTAGCAAGA TGCGTTCCTG TTGGCCTTTT GTTGGCCTCT CCGTTGCCTT GGGCTTAGAA
    GGGAAAGCGG GAGAGCAGCT CAGGTGCTTA AGGTTAAAGG AGAAAAGAAG TGATGTGTTG
    GATAAAAAGG TTTCCCAGCC GACCTGCAGA GGGTGGCTGA GCTGAGGATG GGCGGTTGGA
    R
    CCAGCCACTC CACTTGGGGA AATAGGAAGT TTTTGGAATG AGAGTCTCTC TATACTAACA
    AGGATTTCCC TGTACCCAGA TCCTGGGTAG AAAGCCAGAA GAAATGTGGC TTCCCTTCCT
    TCCAGAACAG GAAGTTAGAC AGAATCCGCA GGCTTGGAAA CTGGATATAA TCATTCCTTA
    AAGGCACGAG TTGGATCAGG                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss39014141 mCV23134806 ABI CRAMUS_MOUSE f SNP A G G G
ss137582777 ENSMUSSNP2314952 ENSEMBL ENSEMBL_Sanger f SNP A G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs29195303 SNP A G G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:33203630 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Atxn7l1 ataxin 7-like 1 within coordinates
Rr260247 regulatory region 260247 1830 bp distal
Rr260248 regulatory region 260248 1030 bp distal
Rr267129 regulatory region 267129 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory