rs29195303 SNP Detail

Summary

• ID
  rs29195303
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33203630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTTCCCTC CTCTGCTGGA
  AGTAGCAAGA TGCGTTCCTG TTGGCCTTTT GTTGGCCTCT CCGTTGCCTT GGGCTTAGAA
  GGGAAAGCGG GAGAGCAGCT CAGGTGCTTA AGGTTAAAGG AGAAAAGAAG TGATGTGTTG
  GATAAAAAGG TTTCCCAGCC GACCTGCAGA GGGTGGCTGA GCTGAGGATG GGCGGTTGGA
  R
  CCAGCCACTC CACTTGGGGA AATAGGAAGT TTTTGGAATG AGAGTCTCTC TATACTAACA
  AGGATTTCCC TGTACCCAGA TCCTGGGTAG AAAGCCAGAA GAAATGTGGC TTCCCTTCCT
  TCCAGAACAG GAAGTTAGAC AGAATCCGCA GGCTTGGAAA CTGGATATAA TCATTCCTTA
  AAGGCACGAG TTGGATCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39014141	mCV23134806	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss137582777	ENSMUSSNP2314952	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29195303					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33203630 () rs orientation: forward

Symbol	Name	Function Class
Atxn7l1	ataxin 7-like 1	within coordinates
Rr260247	regulatory region 260247	1830 bp distal
Rr260248	regulatory region 260248	1030 bp distal
Rr267129	regulatory region 267129	within coordinates