rs29195754 SNP Detail

Summary

• ID
  rs29195754
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31885537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGAAATGTA GAAAGAGCTG
  CATTGTCTGT GTTAATTTGA TTTTAAAAAG GAACATAATG AACATTTAAT ACAGGAGGAG
  TAGTCATTCA CAAATGGTAC TCAAACAATA GTCATATGCA AAAAGATGAA ATTGGACCTT
  TTTTTGTGAC AGTGTATAGA AAAATGAACT AGAAGTGAAT CATAGATCTA AATGTACAAT
  R
  TAGGGGTTAA ACAGATGGCC TAGCAATTGG GAGCTATTGC AGTGCATTGC AGAATTTCCA
  TGTTCAGGAA ATACTTGGTA GACTGCAGAC ACTTAGTGAT ACTTGAGGGA AGAGAGGGGA
  GCTAGGAAAG AGTGGCACAT TCAGAAGTCA CCAGGCACCT CTGTACTTGA ACTTCACCTG
  ACTCGCTCTT CACTAGACGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39010173	mCV24461548	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss137570388	ENSMUSSNP5680306	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29195754					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31885537 () rs orientation: forward

Symbol	Name	Function Class
Cog5	component of oligomeric golgi complex 5	within coordinates
Rr387038	regulatory region 387038	63 bp upstream