rs29195806 SNP Detail

Summary

• ID
  rs29195806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:104306195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTA CAAAGAGTCG AGAGAACATT
  Y
  CCCTGTGTGT CCTTCCACTG CTAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39010655	mCV24511987	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss138018978	ENSMUSSNP1420729	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29195806					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104306195 () rs orientation: forward

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	within coordinates
Tssr114842	transcription start site region 114842	1520 bp downstream
Tssr114843	transcription start site region 114843	835 bp downstream
Tssr114844	transcription start site region 114844	699 bp downstream
Tssr114845	transcription start site region 114845	667 bp downstream
Tssr114846	transcription start site region 114846	578 bp downstream
Tssr114847	transcription start site region 114847	555 bp downstream
Tssr114848	transcription start site region 114848	547 bp upstream
Tssr114849	transcription start site region 114849	574 bp upstream
Tssr114850	transcription start site region 114850	591 bp upstream
Tssr114851	transcription start site region 114851	650 bp upstream
Tssr114852	transcription start site region 114852	707 bp upstream
Tssr114853	transcription start site region 114853	918 bp upstream
Tssr114854	transcription start site region 114854	1061 bp upstream
Tssr117574	transcription start site region 117574	933 bp downstream