rs29197916 SNP Detail

Summary

• ID
  rs29197916
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110247460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAAGGGATT AGTTCTAAGA CAAGGAGAAG GGGAAGAACT
  TGGGAGTCCT AGGCAGAAAG CGCGGGTTGT GGGGCGGGGT GAAGACCAAT CAGTGAATGT
  Y
  GTGTTGGAAA CATTCCTTGT GTATAAACTT TTAAGCTACA ATAATAAAGA CTTGAAGGAA
  GTTGCTCTGA TTGCCTTTGG TCCGTTTATT TTCTCGTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39011016	mCV24498443	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29197916					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110247460 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5110	CpG island 5110	112 bp distal
Cpgi5111	CpG island 5111	743 bp proximal
Dio3	deiodinase, iodothyronine type III	within coordinates
Rr472867	regulatory region 472867	1756 bp distal
Tssr115195	transcription start site region 115195	1795 bp downstream