rs29199658 SNP Detail

Summary

• ID
  rs29199658
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:87456399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACT CCAAACAGAG CGAGGTTAAT
  R
  CCAGGAATTG TTGATAGAAG AGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39016924	mCV23061589	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss137929673	ENSMUSSNP5908987	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss324115204	CHEV_12_88750579	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29199658					SNP	G	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:87456399 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4942	CpG island 4942	1319 bp distal
Gm33444	predicted gene, 33444	within coordinates
Rr258424	regulatory region 258424	1202 bp proximal
Rr268858	regulatory region 268858	603 bp proximal
Rr387583	regulatory region 387583	1070 bp upstream