rs29199860 SNP Detail

Summary

• ID
  rs29199860
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:91365585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGCCAGGG CTATACAGAG AAACCCTGTC TCGAAAAAAA
  AGAAAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAAAG
  R
  AAGGAAGGAA GGAAGGAAGG AAGGAAAAAA GAAAAAAAGA AAGAAAGAAC AGAATGAAGA
  CACAAAAATG GGAATGTTGG GTATGAATGA GTCGACATT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39017426	mCV23722778	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss137957548	ENSMUSSNP5151616	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29199860					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:91365585 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4953	CpG island 4953	1572 bp proximal
Rr258556	regulatory region 258556	1216 bp proximal
Rr265753	regulatory region 265753	1415 bp proximal
Tssr114585	transcription start site region 114585	1627 bp upstream
Tssr114586	transcription start site region 114586	1655 bp upstream