rs29203879 SNP Detail

Summary

• ID
  rs29203879
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73421408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACTAAAC TCAATACAAG
  GGAAATAAGA GTGGAAACCA ATAAAATTGA AAACAGGAAA GAAAAAAAAA CCCAACAGAG
  AAAGATTAAT AACAGGAAAA CCTGGTTCTC TGAGAAGCCC AATAAAATGG GTAAGTGTCA
  CAGACAGGAG GAAAGTATCC TGACTTTGCC TGCAGACCAA GAGTTGTATC TTAGACTGAA
  M
  CGTGGCTGCA GTCTGTGCTT GACCTTAATG CCACCCAATC TGACTGCAGC GGCCTCCAGT
  GGCCTCCCCA GAGTTAAGGG GAGAAAAGTT GGGAGCCCTT TGGCACCTTT TCTTCTGCAA
  TGGCGTCCTT CTGGCCTGAA CTGTGGGCAG CAGTCAGTTT TGGCCTTGCT CTCTTTTATT
  TCATCCTTAG TCAGTGGGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39017319	mCV24989797	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss137886672	ENSMUSSNP605861	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29203879					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73421408 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	within coordinates
Rr261220	regulatory region 261220	1193 bp proximal
Rr264130	regulatory region 264130	14 bp proximal