rs29206430 SNP Detail

Summary

• ID
  rs29206430
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:13475672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTTTCTCAGA CACTGTGTTG CTTTGGCAGT TCCCAGGTGG TACAGACTCT CACCTAAGCA
  GACTAAATTC CTAAGTTCCT TGGAGTCCCG GGACCAAGAT GGCGACCGCT GCTGCTGTGG
  CTTAGGCCGC CTCCCCAGCC GGGTGGGCAC CTGTTCTCCG GTCCGGAAGG TGGCCGGCTG
  TCCCTGGCCC ACACAGGGTG CTGCCTCAGC GCCTCTGTGC TTCTGCCTGT TCCAGAAGCT
  GTCAGGTTCT CTGGTGCACC CTCTCACCTG TTCAGACTAA TTTCCTAAGT TCGGCGGGTC
  Y
  CGGACCAAGA TGGCGACCGC TGCTGCTGTG GCTTAGGCCG CCTCCCCAGC CGGGCGGGCA
  CCTGTCCTCC GGTTCGGACG GTGGCCGGCT GTCCCCGGCC CACAAAGGGT GCTGCCTCAG
  CGCCTCTGTG CTTCCGCCTG TTCCAGAAGC TGTCAGGTTC TCTGGCGCAC CCTCTCACCT
  GTTCAGACTA ATTTCCTAAG TTCGGCGGGT CCCGGACCAA GATGGCGACC GCTGCTGCTG
  TGGCTTCTCT GCCTGGTTTT GTAAGCATAA ACACTAAGCT AGCTGTGTGG GATCCCACTC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39024767	mCV24746061	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29206430					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:13475672 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm48309	predicted gene, 48309			within coordinates
Nbas	neuroblastoma amplified sequence			Intron
				Noncoding-Transcript-Variant
Rr386880	regulatory region 386880			within coordinates