rs29210189 SNP Detail

Summary

• ID
  rs29210189
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33452206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GATGGAGCCC CACACTCAGG AAACTGAGGC AGGAGGATCT CTGTGAGTTC AAGGTCAGCC
  TGGTCTACCC TGTGAATTCC AGGCCACCCT GCATAGTGTG ATTCTGTTTC AGAAACCCAA
  AAACAAATCG GAAATAGGAA GGCTGGTAAT AGTTCCATGG GTAAAGTTGC CTGTTGGCAA
  GTTTGGTAAC CTGAGTTCAA TTTTTGGAAT CCACATGGTA GAAGGAGAGA ACCATTTCCC
  CCAAGTTGTC ATCTGGGCTG CACACACACA CACACACACA CACACACACA CACACACACA
  Y
  AATTTAAATC ATAATGAAAA CAAGTAGGGG TTGGAGATTC CATGTACTAG AGAGAGTGCT
  TGCCGAGCAT GAATGAAGCA TGGAACGGGG CTGGGGTGTC AGAGCACTCA GAAGATGGAG
  GCAGAAAGGT CAGAAGTTCA GGGTCACCCT CTACTAGTAC ACAACAAGTT CAAGGCCAGC
  CTGCGATATA TGAAACCGAA TTTCAAAAAC AAAAAACAAA CAAACAAACA AACAAAAAAA
  CAAATCATCA AACCAAAAAC AACCATAGCT TCCTGAAAGA AGTACACATG AGTGTCTGTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39027665	mCV24566611	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29210189					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33452206 () rs orientation: forward

Symbol	Name	Function Class
Efcab10	EF-hand calcium binding domain 10	940 bp downstream
Gm47506	predicted gene, 47506	within coordinates
Gm61262	predicted gene, 61262	within coordinates
Rr260275	regulatory region 260275	795 bp proximal
Rr267149	regulatory region 267149	1195 bp proximal