rs29210807 SNP Detail

Summary

• ID
  rs29210807
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:109709506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGG AGGGTGGCTC CTCACTGAAT
  S
  GGGAGTTATA ATCTCTGAGG GGCTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39029633	mCV24948046	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
ss324156208	CHEV_12_110981282	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29210807					SNP	G	C	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:109709506 () rs orientation: forward

Symbol	Name	Function Class
Gm54371	predicted gene, 54371	86 bp downstream
Mir369	microRNA 369	346 bp upstream
Mir409	microRNA 409	86 bp upstream
Mir410	microRNA 410	643 bp upstream
Mir412	microRNA 412	217 bp upstream
Mir541	microRNA 541	574 bp downstream
Mirc7	microRNA cluster 7, including Mir382 through Mir3072	within coordinates
Mirc36	microRNA cluster 36, including Mir379 through Mir3072	within coordinates
Mirc46	microRNA cluster 46, including Mir409 through Mir410	86 bp proximal
Mirg	miRNA containing gene	within coordinates
Tssr115183	transcription start site region 115183	1420 bp downstream
Tssr115184	transcription start site region 115184	715 bp upstream
Tssr117762	transcription start site region 117762	1450 bp upstream