rs29210911 SNP Detail

Summary

• ID
  rs29210911
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:108625039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCACACAG AAATCGCACC CGTCACCTTG GCCTGCTGAG
  CACCACCAGA ACCAAGAAGC ACAGCACCCC AAACCAAGCA GCAGCCCTGG TGAAGTCCCC
  R
  TGAATGTGGC CGTGATGTGT GTGAGCTGTG GAAGGAGCTG TGGATGCAGA CCTGGGCAGT
  GTGTGGGGTT TCGATTCGGA TTCTGTAACC GCCATGACC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39031527	mCV24944373	ABI	CRAMUS_MOUSE	f	SNP		G	G					G		A
ss51047115	NES14373348	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G		G	A	G	G	G	G	G	G	G
ss138677511	ENSMUSSNP3488311	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29210911					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047115	NES14373348	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:108625039 () rs orientation: forward

Symbol	Name	Function Class
Evl	Ena-vasodilator stimulated phosphoprotein	within coordinates
Mir342	microRNA 342	62 bp downstream
Rr472585	regulatory region 472585	958 bp distal
Rr472586	regulatory region 472586	1196 bp distal
Tssr114995	transcription start site region 114995	72 bp downstream