rs29215423 SNP Detail

Summary

• ID
  rs29215423
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76757357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCGG GCGGGTTACG TTAGAAAGCG
  Y
  GCTCCCGGCC GGCTACAACC GGCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39032849	mCV23154819	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss137907990	ENSMUSSNP6441396	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29215423					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76757357 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4785	CpG island 4785	within coordinates
Rr468233	regulatory region 468233	571 bp distal
Rr468234	regulatory region 468234	70 bp distal
Rr468235	regulatory region 468235	within coordinates
Sptb	spectrin beta, erythrocytic	36 bp upstream
Tssr116745	transcription start site region 116745	588 bp upstream
Tssr116746	transcription start site region 116746	557 bp upstream
Tssr116747	transcription start site region 116747	529 bp upstream
Tssr116748	transcription start site region 116748	495 bp upstream
Tssr116749	transcription start site region 116749	476 bp upstream
Tssr116750	transcription start site region 116750	430 bp upstream