rs29215710 SNP Detail

Summary

• ID
  rs29215710
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107091417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATG TTTTGTGATG ACTTGCAGGC
  M
  CTGGGCAGAG AGGCAGTGGA AGTTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39032769	mCV22891492	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss138024997	ENSMUSSNP3544763	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
ss324146398	CHEV_12_108363368	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29215710					SNP	C	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107091417 () rs orientation: forward

Symbol	Name	Function Class
Gm16084	predicted gene 16084	within coordinates
Rr369596	regulatory region 369596	544 bp downstream
Rr369597	regulatory region 369597	1026 bp upstream
Rr472319	regulatory region 472319	1240 bp distal
Rr472320	regulatory region 472320	423 bp distal
Tssr114936	transcription start site region 114936	702 bp downstream
Tssr117620	transcription start site region 117620	1438 bp upstream