rs29216775 SNP Detail

Summary

• ID
  rs29216775
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110666716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTATGGCTC TTAGTTGTCA
  TCTTATTCAG TGCACCCCAG GGCCCACCCT AGGGTCTCAT CTAAGTTCTT CAGCACCCCT
  TTGAAACATA ACTCTAGAAG CCACTGCGAT CCTATATATA GCTACTGAGT TGACACTTGA
  GCACAACTCT CCTGAGTTTG TATGTGTGCG TGTGTGTGTC TTGCTTTTCC TGAGCAGCTA
  Y
  TGATCCTCCT GCTTAAATAT ATGTTAAAAT TTCCTCTTAA ATTCTAGCTC TACTTGACAC
  TAGCTTGTCT CAAACATCTT TTCAACAGTA AAGTTAAGAA TGCTGTTTTT GTCAGGTGGT
  GGTGGCACAC ACCTTTACTC TCAGCACTTG GGAGGCAGAG GCAGGTAGAT TCTGAGTTCG
  AGGCCAGCCT GGTCTACAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39035031	mCV24497727	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss138692782	ENSMUSSNP5597957	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29216775					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110666716 () rs orientation: forward

Symbol	Name	Function Class
Gm60091	predicted gene, 60091	1848 bp downstream
Gm60092	predicted gene, 60092	704 bp downstream
Rr472970	regulatory region 472970	1207 bp distal
Rr472971	regulatory region 472971	779 bp distal
Rr472972	regulatory region 472972	548 bp distal
Rr472973	regulatory region 472973	386 bp proximal
Tssr115233	transcription start site region 115233	1178 bp downstream