rs29217755 SNP Detail

Summary

• ID
  rs29217755
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112642911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA GGGGGGCTGG TTGGTGTCAG
  Y
  GTTCAACATC CAGCCATCAT TTTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39035563	mCV23219082	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss138725642	ENSMUSSNP1810086	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29217755					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112642911 () rs orientation: forward

Symbol	Name	Function Class
Akt1	thymoma viral proto-oncogene 1	1645 bp upstream
Cpgi5173	CpG island 5173	1568 bp distal
Cpgi5174	CpG island 5174	1626 bp proximal
Gm30150	predicted gene, 30150	507 bp downstream
Rr369631	regulatory region 369631	938 bp downstream
Rr473556	regulatory region 473556	530 bp distal
Rr473557	regulatory region 473557	1474 bp distal
Rr473558	regulatory region 473558	1009 bp distal
Rr473559	regulatory region 473559	818 bp distal
Rr473560	regulatory region 473560	572 bp distal
Rr473561	regulatory region 473561	1849 bp proximal
Rr473562	regulatory region 473562	1861 bp proximal
Tssr117882	transcription start site region 117882	1713 bp upstream
Tssr117883	transcription start site region 117883	1663 bp upstream
Tssr117884	transcription start site region 117884	1640 bp upstream