rs29217830 SNP Detail

Summary

• ID
  rs29217830
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52656035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACATTACC TAAAATCTCT
  GATACACGAT ACACGTTTCT CTTTTTAATC CACAGAAGAG GCATGGTTTT AATTAAAAAA
  TAGTTTTATA TAAGTTTGGA GTTCTTCCAC TGAGTTTCCC AGTGGACTCA CCTAACAAAG
  CTAAGTATAT TTATAGTCCG AGAAAGTACA GTTTATGGTC TAATTAAAGC TCAGATACAT
  Y
  TTTCTTCATT TTTTCATGAC AATAGAAATT TGATGACTTT TTCTTATTGA AGTACTCTCT
  GTTAATTTTA TAGTTTCTTT GTCTTTCCAC AGATGATTCA GTGCTAACCT TCGATAGCAA
  TAGTTGGGAA TTTGGTGTGA AGATTTATTG AATATGCGCT ATGACTATTT TTAGAGATAA
  AATCTCTGTT GGGTGAAATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39034888	mCV22548488	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss137738465	ENSMUSSNP4628040	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29217830					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52656035 () rs orientation: forward

Symbol	Name	Function Class
Gm35239	predicted gene, 35239	within coordinates
Tssr113445	transcription start site region 113445	1609 bp downstream