rs29218150 SNP Detail

Summary

• ID
  rs29218150
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69839023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGC GCCAACACCT CTCTCTTCCC
  Y
  AGTGGGCTGC AGTTCTCACT TGGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39034496	mCV24218139	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss137860612	ENSMUSSNP2896283	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss324085707	CHEV_12_70893236	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29218150					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69839023 () rs orientation: forward

Symbol	Name	Function Class
4930512B01Rik	RIKEN cDNA 4930512B01 gene	within coordinates
Cdkl1	cyclin dependent kinase like 1	982 bp upstream
Cpgi4702	CpG island 4702	849 bp distal
Rr257091	regulatory region 257091	23 bp distal
Rr265514	regulatory region 265514	422 bp distal
Tssr116527	transcription start site region 116527	1976 bp upstream
Tssr116528	transcription start site region 116528	1973 bp upstream
Tssr116529	transcription start site region 116529	1951 bp upstream
Tssr116530	transcription start site region 116530	1618 bp upstream
Tssr116531	transcription start site region 116531	1514 bp upstream
Tssr116532	transcription start site region 116532	956 bp upstream
Tssr116533	transcription start site region 116533	954 bp upstream
Tssr116534	transcription start site region 116534	926 bp upstream
Tssr116535	transcription start site region 116535	911 bp upstream
Tssr116536	transcription start site region 116536	885 bp upstream