rs29218309 SNP Detail

Summary

• ID
  rs29218309
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:36532449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGATACAAAC GCTCTCTCAG TGGGCACCCT GGCAGGTTTT ACCTTCCACC GGTGCAGCCT
  TCATTCCTTC CATTCAGTGC TGTGCCTTTA GTTGACCTTG AGAACAACGG TCTTGCCTTC
  TAGTATTTGT TCTAGACCTG CTGACAGCAT CACACACATT CCGGGAAAAT GGATGATAAC
  TAACTGGTAA ATTTGTAGAC ATACCCAGCA ATAGAATAAA CATAAAAATG GAATTTCAGC
  TGGGCGCTGG TGGCACACGC CTTTAATCCC AGCACTTGGG AGGCAGAGCT AGGCAGATTT
  Y
  TAAGCTCGAG GCCAGCCTGG TCTACAGCGT GAGTTCCAGG ACAGCCAGGG CTACACAGAA
  AAACCCTGTC TCAGAAAAAA AAAAAAGAGA GAGAGAGAGA AAGAAAAAGG GAAAAATGGA
  ATTTCAGAAG AATCATTTAA AAATGGATAG TTATGTACTG TTAAGGCTCT CTATTTTTTA
  ATTTTATAAT TCTGGTCTTT GTAAACAGCA CCTTCCTATT TTAAGGTAAC TTGTAACTTT
  TGACATGCTG TAATATGTAT GCTGCACATT CTGTAATTTG GTACATTTCA GCTAATCTCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss39035765	mCV22951299	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29218309					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:36532449 () rs orientation: forward

Symbol	Name	Function Class
Crppa	CDP-L-ribitol pyrophosphorylase A	Intron
Rr387069	regulatory region 387069	within coordinates
Rr465183	regulatory region 465183	975 bp proximal