rs29218579 SNP Detail

Summary

• ID
  rs29218579
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31885109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGAGAGA AGCAACGGAA
  AGCAGGACAG ACTTGGTTTT GGCTTATGGC TTTCCAGGTT TCTTTCCAGT TTGGTTGTTG
  TTTGCTGTGT TGTGTTGTGT TTTGTTTCTG ACAAAGTAAA AACATCATGG AGGAGTACGG
  TGGAGGGAAA TAGTTCACCT CACAGCCGCC CAGGAGCAGA GGATAGCATG TTGCTCCTGG
  R
  GGCTTGCTCC CAGTGATCTA CTTCTTCCCC TTGGCACCAC TGCCAACTTT CTACCCTTTT
  CTCAGTAATA CCATTTGTAT GATTAGACCA TCAAGGATTT CGTCCATTTG TTAAGTTTAG
  GGAGCTTCCC CAAACCCATT ACTAGCAGCT CAGCTCCCAA TGTCTGTAGG GGACATCTCC
  TATTCTAATA GTAATGGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39035889	mCV24461555	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss137570376	ENSMUSSNP6746283	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29218579					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31885109 () rs orientation: forward

Symbol	Name	Function Class
Cog5	component of oligomeric golgi complex 5	within coordinates
Rr387038	regulatory region 387038	491 bp upstream