rs29220106 SNP Detail

Summary

• ID
  rs29220106
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:64520087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGGGGCC TCCTCAGCTG
  GTGCAGGTGG AACTTCTGCA GGCCCCTCTT CAGATAGTGG AGGTGGAACT TCTGCAGGCC
  CCTCTTCAGT TGGTTGAGGT GGAACTTCTG TAGGGCCCTC CTCAGTTGGT GTAGATAGAA
  CTTCTGCAGT CAGGTCTTCT ACAGTTCCCT GTTCAGTTGA TGGAGGCAGA ACTTCTGAAG
  R
  AGCCACTTCT TCAGAAGCAT CCTCTGCTGA TGGAGGCTGA ACTTCTGCAG TAGCCTTATC
  TGCAGAGACT TCCTCAATTA TTGGAGGCTT ATATTCTTCA AAGACCTCAT CAGTAGCAAA
  TTTCTCATTT ATTAAAATAG CACTTTCTTC AAAGTCTGCA GCTATCGGAA AATGAACTTC
  AGCAGGTACT TCTTTAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39037343	mCV22326214	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss137828165	ENSMUSSNP5396078	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss324070146	CHEV_12_65574300	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29220106					SNP	A	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64520087 () rs orientation: forward

Symbol	Name	Function Class
Fscb	fibrous sheath CABYR binding protein	Coding-NonSynonymous
Tssr3851	transcription start site region 3851	1604 bp downstream
Tssr116460	transcription start site region 116460	1572 bp downstream