rs29220167 SNP Detail

Summary

• ID
  rs29220167
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:108626668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGC ATCGTCATAG TATCTCCTGA
  R
  TTCTCTAGAG AGGTTAGGAA TTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39037468	mCV24944371	ABI	CRAMUS_MOUSE	f	SNP		A	G
ss51047093	NES14373274	PERLEGEN	MM_PANEL2	f	SNP	A		G	A	A	G	G	G	G			G	G		G
ss138677520	ENSMUSSNP2777667	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G								G
ss324154910	CHEV_12_109898619	CHEVERUD	SCREENING_POP	f	SNP										G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29220167					SNP	A	A	G	A	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047093	NES14373274	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:108626668 () rs orientation: forward

Symbol	Name	Function Class
Evl	Ena-vasodilator stimulated phosphoprotein	Intron
Mir342	microRNA 342	1691 bp downstream
Tssr114995	transcription start site region 114995	1701 bp downstream